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SRX14609016: Whole-genome sequencing of Clarias gariepinus with nanopore technology
1 OXFORD_NANOPORE (PromethION) run: 3.3M spots, 89.5G bases, 73.2Gb downloads

Design: Nanopore sequencing of gonads sample
Submitted by: Leibniz Institute for Farm Animal Biology (FBN)
Study: Clarias gariepinus Genome sequencing and assembly
show Abstracthide Abstract
African catfish (Clarias gariepinus) is highly sought after for its meat quality and taste. It is extensively cultured worldwide in many countries in Africa, Europa, and Asia. A high-quality reference genome sequence with annotation of protein-coding genes is crucial for understanding important biological traits such as immune responses to various infectious agents, oxygen metabolism, physiological processes, and genetic breeding programs. This haplotype-resolve T2T genome assembly will provide resources to study this commercially valuable fish further.
Sample: Model organism or animal sample from Clarias gariepinus
SAMN26920428 • SRS12377420 • All experiments • All runs
Library:
Name: ONT_01
Instrument: PromethION
Strategy: WGS
Source: GENOMIC
Selection: unspecified
Layout: SINGLE
Runs: 1 run, 3.3M spots, 89.5G bases, 73.2Gb
Run# of Spots# of BasesSizePublished
SRR184768053,333,94189.5G73.2Gb2022-03-25

ID:
20887846

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